Structural Characteristics of Protein Binding Sites for Calcium and Lanthanide Ions

Notes on a 2001 JBIC review comparing structural features of Ca2+ and lanthanide-binding sites in proteins. Discusses coordination geometries, ligand types, and structural classes of metal-binding motifs, including under-representation of EF-hand in structural databases.

Structural Characteristics of Protein Binding Sites for Calcium and Lanthanide Ions

Notes on a 2001 JBIC review comparing structural features of Ca2+ and lanthanide-binding sites in proteins. Discusses coordination geometries, ligand types, and structural classes of metal-binding motifs, including under-representation of EF-hand in structural databases.

Diversity of Conformational States and Changes within the EF-hand Protein Superfamily

Notes on a 1999 Proteins review analyzing the conformational diversity of EF-hand motifs in calcium-binding proteins. Introduces Vector Geometry Mapping (VGM) to dissect helix movements beyond simple interhelical angles, and discusses functional implications of EF-hand plasticity.

Diversity of Conformational States and Changes within the EF-hand Protein Superfamily

Notes on a 1999 Proteins review analyzing the conformational diversity of EF-hand motifs in calcium-binding proteins. Introduces Vector Geometry Mapping (VGM) to dissect helix movements beyond simple interhelical angles, and discusses functional implications of EF-hand plasticity.

Structural Basis for Diversity of the EF-hand Calcium-binding Proteins

Notes on 2006 JMB review detailing EF-hand protein diversity, mechanisms of Ca2+ binding, and conformational change. Highlights the EFbeta-scaffold model and structural determinants of domain opening in calcium-binding proteins.

Structural Basis for Diversity of the EF-hand Calcium-binding Proteins

Notes on 2006 JMB review detailing EF-hand protein diversity, mechanisms of Ca2+ binding, and conformational change. Highlights the EFbeta-scaffold model and structural determinants of domain opening in calcium-binding proteins.

Structures and Metal-ion Binding Properties of the Ca2+-Binding Helix–Loop–Helix EF-hand Motifs

Notes on 2007 Biochemical Journal review discussing EF-hand structural diversity, Ca²⁺/Mg²⁺ binding properties, cooperativity, and conformational changes. Focus on EF-hand pairing, metal selectivity, and functional adaptation for signaling.

Structures and Metal-ion Binding Properties of the Ca2+-Binding Helix–Loop–Helix EF-hand Motifs

Notes on 2007 Biochemical Journal review discussing EF-hand structural diversity, Ca²⁺/Mg²⁺ binding properties, cooperativity, and conformational changes. Focus on EF-hand pairing, metal selectivity, and functional adaptation for signaling.

Protein Grabs a Ligand by Extending Anchor Residues: Ca²⁺ Binding Mechanism of Calmodulin

Notes on 2005 Biophysical Journal article analyzing atomistic pathways of Ca²⁺ binding to calmodulin, highlighting stepwise binding, dehydration coupling, and residue dynamics.

Protein Grabs a Ligand by Extending Anchor Residues: Ca²⁺ Binding Mechanism of Calmodulin

Notes on 2005 Biophysical Journal article analyzing atomistic pathways of Ca²⁺ binding to calmodulin, highlighting stepwise binding, dehydration coupling, and residue dynamics.

Variable Calcium Sensitivity in Arabidopsis CDPKs: Activated or Not by Calcium?

Note on the differential calcium sensitivity among Arabidopsis CDPK isoforms, highlighting the diversity of activation mechanisms and implications for calcium signaling in plants.

Variable Calcium Sensitivity in Arabidopsis CDPKs: Activated or Not by Calcium?

Note on the differential calcium sensitivity among Arabidopsis CDPK isoforms, highlighting the diversity of activation mechanisms and implications for calcium signaling in plants.

Membrane Binding of Recoverin: From Mechanistic Understanding to Biological Functionality

A comprehensive study unraveling the molecular dynamics of recoverin’s membrane binding via its calcium-dependent myristoyl switch, highlighting the importance of N-terminal domain conformations and transient C-terminal interactions.

Membrane Binding of Recoverin: From Mechanistic Understanding to Biological Functionality

A comprehensive study unraveling the molecular dynamics of recoverin’s membrane binding via its calcium-dependent myristoyl switch, highlighting the importance of N-terminal domain conformations and transient C-terminal interactions.

Common Activation Mechanism in CDPK: Structural Insights into CAD Refolding

Note on the detailed structural study of CDPK activation, focusing on apicomplexan CAD conformations (CpCDPK, PfCDPK3), offering new insight into a potentially universal activation mechanism for CDPKs.

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